Publications

Li, Ran, Weina Duan, Dong Zhang, Ulrike Hoffmann, Junjie Yao, Wei Yang, and Huaxin Sheng. “Mouse Cardiac Arrest Model for Brain Imaging and Brain Physiology Monitoring During Ischemia and Resuscitation.” J Vis Exp, no. 194 (April 14, 2023). https://doi.org/10.3791/65340.

Wang, Ruofan, Jing Zhu, Jun Xia, Junjie Yao, Junhui Shi, and Chiye Li. “Photoacoustic imaging with limited sampling: a review of machine learning approaches.” Biomedical Optics Express 14, no. 4 (April 2023): 1777–99. https://doi.org/10.1364/boe.483081.

Wang, Zhuoran, Qiang Li, Brad J. Kolls, Brian Mace, Shu Yu, Xuan Li, Wei Liu, et al. “Sustained overexpression of spliced X-box-binding protein-1 in neurons leads to spontaneous seizures and sudden death in mice.” Commun Biol 6, no. 1 (March 9, 2023): 252. https://doi.org/10.1038/s42003-023-04594-8.

Yao, Junjie. “Deep-tissue photoacoustic imaging of photoswitchable transgenic mouse models.” In The Journal of the Acoustical Society of America, 153:A152–A152. Acoustical Society of America (ASA), 2023. https://doi.org/10.1121/10.0018474.

Yao, Junjie. “Real-time passive cavitation mapping with high spatial-temporal resolution.” In The Journal of the Acoustical Society of America, 153:A315–A315. Acoustical Society of America (ASA), 2023. https://doi.org/10.1121/10.0018980.

Jing, Yun, Mucong Li, Juanjuan Gu, Pei Zhong, and Junjie Yao. “Time-resolved passive cavitation mapping using the transient angular spectrum approach.” In The Journal of the Acoustical Society of America, 153:A268–A268. Acoustical Society of America (ASA), 2023. https://doi.org/10.1121/10.0018806.

Oliinyk, Olena S., Chenshuo Ma, Sergei Pletnev, Mikhail Baloban, Carlos Taboada, Huaxin Sheng, Junjie Yao, and Vladislav V. Verkhusha. “Author Correction: Deep-tissue SWIR imaging using rationally designed small red-shifted near-infrared fluorescent protein.” Nat Methods 20, no. 3 (March 2023): 469. https://doi.org/10.1038/s41592-023-01798-y.

Yao, J., and V. T. Nguyen. “High-Speed Photoacoustic Microscopy Captures Processes Within Tissue.” Biophotonics International 30, no. 2 (March 1, 2023): 29–34.

Cupil-Garcia, Vanessa, Joy Q. Li, Stephen J. Norton, Ren A. Odion, Pietro Strobbia, Luca Menozzi, Chenshuo Ma, et al. “Plasmonic nanorod probes' journey inside plant cells for in vivo SERS sensing and multimodal imaging.” Nanoscale 15, no. 13 (March 2023): 6396–6407. https://doi.org/10.1039/d2nr06235f.

Xiang, Gaoming, Daiwei Li, Junqin Chen, Arpit Mishra, Georgy Sankin, Xuning Zhao, Yuqi Tang, Kevin Wang, Junjie Yao, and Pei Zhong. “Dissimilar cavitation dynamics and damage patterns produced by parallel fiber alignment to the stone surface in holmium:yttrium aluminum garnet laser lithotripsy.” Physics of Fluids (Woodbury, N.Y. : 1994) 35, no. 3 (March 2023): 033303. https://doi.org/10.1063/5.0139741.

Tang, Yuqi, Shanshan Tang, Chengwu Huang, Paul Klippel, Chenshuo Ma, Nathan Caso, Shigao Chen, Yun Jing, and Junjie Yao. “High-fidelity deep functional photoacoustic tomography enhanced by virtual point sources.” Photoacoustics 29 (February 2023): 100450. https://doi.org/10.1016/j.pacs.2023.100450.

Menozzi, Luca, Ángela Del Águila, Tri Vu, Chenshuo Ma, Wei Yang, and Junjie Yao. “Three-dimensional non-invasive brain imaging of ischemic stroke by integrated photoacoustic, ultrasound and angiographic tomography (PAUSAT).” Photoacoustics 29 (February 2023): 100444. https://doi.org/10.1016/j.pacs.2022.100444.

Shijo, V., T. Vu, J. Yao, W. Xu, and J. Xia. “SwinIR for Photoacoustic Computed Tomography Artifact Reduction.” In IEEE International Ultrasonics Symposium, IUS, 2023. https://doi.org/10.1109/IUS51837.2023.10307937.

Oliinyk, Olena S., Chenshuo Ma, Sergei Pletnev, Mikhail Baloban, Carlos Taboada, Huaxin Sheng, Junjie Yao, and Vladislav V. Verkhusha. “Deep-tissue SWIR imaging using rationally designed small red-shifted near-infrared fluorescent protein.” Nat Methods 20, no. 1 (January 2023): 70–74. https://doi.org/10.1038/s41592-022-01683-0.

Taboada, Carlos, Jesse Delia, Maomao Chen, Chenshuo Ma, Xiaorui Peng, Xiaoyi Zhu, Laiming Jiang, et al. “Glassfrogs conceal blood in their liver to maintain transparency.” Science (New York, N.Y.) 378, no. 6626 (December 2022): 1315–20. https://doi.org/10.1126/science.abl6620.

Chen, Maomao, Laiming Jiang, Clare Cook, Yushun Zeng, Tri Vu, Ruimin Chen, Gengxi Lu, et al. “High-speed wide-field photoacoustic microscopy using a cylindrically focused transparent high-frequency ultrasound transducer.” Photoacoustics 28 (December 2022): 100417. https://doi.org/10.1016/j.pacs.2022.100417.

Yao, Junjie, Zhicheng Zhou, Lutao Li, Yuan Chen, Chen Wang, Xiangyi Wang, Zheng Lu, et al. “Zero-Dimensional Cs₃BiX₆ (X = Br, Cl) Single Crystal Films with Second Harmonic Generation.” Nanoscale Research Letters 17, no. 1 (December 2022): 115. https://doi.org/10.1186/s11671-022-03759-4.

Kilian, Hailey I., Chenshuo Ma, Huijuan Zhang, Maomao Chen, Anoop Nilam, Breandan Quinn, Yuqi Tang, Jun Xia, Junjie Yao, and Jonathan F. Lovell. “Intraperitoneal administration for sustained photoacoustic contrast agent imaging.” Photoacoustics 28 (December 2022): 100406. https://doi.org/10.1016/j.pacs.2022.100406.

Li, Mucong, Nathan Beaumont, Chenshuo Ma, Juan Rojas, Tri Vu, Max Harlacher, Graeme O’Connell, et al. “Three-Dimensional Deep-Tissue Functional and Molecular Imaging by Integrated Photoacoustic, Ultrasound, and Angiographic Tomography (PAUSAT).” IEEE Trans Med Imaging 41, no. 10 (October 2022): 2704–14. https://doi.org/10.1109/TMI.2022.3168859.

Zhang, Ruiying, Lei S. Li, Bin Rao, Haoyang Rong, Min-Yu Sun, Junjie Yao, Ruimin Chen, et al. “Multiscale photoacoustic tomography of neural activities with GCaMP calcium indicators.” Journal of Biomedical Optics 27, no. 9 (September 2022). https://doi.org/10.1117/1.jbo.27.9.096004.

Chen, Junqin, Daiwei Li, Wenjun Yu, Zhiteng Ma, Chenhang Li, Gaoming Xiang, Yuan Wu, Junjie Yao, and Pei Zhong. “The Effects of Scanning Speed and Standoff Distance of the Fiber on Dusting Efficiency during Short Pulse Holmium: YAG Laser Lithotripsy.” J Clin Med 11, no. 17 (August 28, 2022). https://doi.org/10.3390/jcm11175048.

Zhang, Wenxu, Yajuan Li, Anthony A. Fung, Zhi Li, Hongje Jang, Honghao Zha, Xiaoping Chen, et al. “Multi-Molecular Hyperspectral PRM-SRS Imaging.” Cold Spring Harbor Laboratory, July 25, 2022. https://doi.org/10.1101/2022.07.25.501472.

Zhu, Xiaoyi, Qiang Huang, Anthony DiSpirito, Tri Vu, Qiangzhou Rong, Xiaorui Peng, Huaxin Sheng, et al. “Real-time whole-brain imaging of hemodynamics and oxygenation at micro-vessel resolution with ultrafast wide-field photoacoustic microscopy.” Light Sci Appl 11, no. 1 (May 17, 2022): 138. https://doi.org/10.1038/s41377-022-00836-2.

Tang, Yuqi, Huaiyu Wu, Paul Klippel, Bohua Zhang, Hsiao-Ying Shadow Huang, Yun Jing, Xiaoning Jiang, and Junjie Yao. “Deep thrombosis characterization using photoacoustic imaging with intravascular light delivery.” Biomedical Engineering Letters 12, no. 2 (May 2022): 135–45. https://doi.org/10.1007/s13534-022-00216-0.

Kasatkina, Ludmila A., Chenshuo Ma, Mikhail E. Matlashov, Tri Vu, Mucong Li, Andrii A. Kaberniuk, Junjie Yao, and Vladislav V. Verkhusha. “Optogenetic manipulation and photoacoustic imaging using a near-infrared transgenic mouse model.” Nature Communications 13, no. 1 (May 2022): 2813. https://doi.org/10.1038/s41467-022-30547-6.